Finally, thanks to Marcella gluing to fly wheels instead of one, the mutant data are starting to roll in on the shortened self-learning experiment:

Short yaw torque learning, i.e., only one minute per period. Orange: training, yellow: test. WTB: wild type Berlin, rut: rutabaga learning mutants. With this short training of only 4 minutes, wild type flies show no torque preference in the after training, while at least the first few rutabaga flies show such a preference:

So far, I only could get one radish fly to make it through the experiment, so I cannot display it here.

Below you can find the data I collected from the offspring flies:

-> offspring from trained parents

-> offspring from untrained parents

(I left out data from flies that showed negative preference during two training periods in a row)

Eight minutes of yaw torque training work just fine for both wild type and mutant flies:

Reducing the training to four minutes is not enough for wild type flies:

Now it will be exciting to see if the mutants still do what they did many years ago: learn better than wild type.

Since the results I got after training the parental flies looked a bit odd on first sight I decided to take a closer view…

First I excluded some weird animals that either showed a larger preference for one side than avoidance or showed no avoidance two training periods in a row:

Next I compared the behavior of flies that showed avoidance but no learning with the behavior of the remaining flies:

-> Avoidance is almost the same but note the first test period!

Lastly I split the data according to male and female flies. Here is what I got:

-> Looks a bit like there is negative learning in the male flies however I don´t have enough data to be sure…

As an overview here are all the flies (except for the excluded ones) together again:

Below you find the data from my experimental rounds A and B:

-> learning scores of the parental flies from experimental round A and B

-> learning scores of the trained parent´s offspring only from experimental round A

-> learning scores of the untrained parent´s offspring only from experimental round A

The results confuse me a lot and I am happy to discuss reasons :) However the offspring of the round-B will be ready for testing by the end of this week so there is still some data to collect…

I now switched the sign of the Optomotor Asymmetry Index in flies that were punished on producing right-turning torque, such that weaker punished torque shows up as a positive index. After that was done, I plotted the correlation between the optomotor index and the preference index:

I had to get rid of eight flies where the optomotor response was already asymmetric before the training started, so now I only have 33 flies. But with these flies, there is no correlation before training and a very significant correlation after training.

Any suggestions about appearance of the graphs?

Would it be useful to plot optomotor and performance indices as raincloudplots next to the regressions?

This would be the complete figure:

The results of comparing optomotor responses after self-learning remain solid. There still is a small asymmetry between the left/right groups, but nothing dramatic:

DNA Assembly in a 1:2 ratio of vector to insert with gRNAs of rsh and rut (Q5 and template concentration: 640 pg/µl) and 100ng of pCFD6 BbsI AP (using QuickCIP). Heat-shock (hs) transformation into E. coli (DH5α competent) with 10 µl Assembly Reaction and 100 µl cells.

For Crtl, pCFD6 BbsI AP was wrongly used.

DNA Assembly in a 1:2 ratio of vector to insert with the gRNAs of rsh and rut (Q5 and template concentration: 640 pg/µl) and 100ng of pCFD6 BbsI AP (using FastAP and 2 extraction steps). Heat-shock (hs) transformation into E. coli (DH5α competent) with 10 µl Assembly Reaction and 100 µl cells.

For Crtl, pCFD6 BbsI AP was used in reaction.

The offspring of my first experimental fly cohort finally hatched! Below you find a few first pre-tests I ran last week :)

First, here are the results of a quick test to see if the offspring shows a preference for the parentally trained side after the first training period:

After that I played around with the laser a little bit to find the learning threshhold. I set the laser on 2,6V but the results I got look a bit weird:

-> untrained wtb flies

-> offspring of trained wtb flies

I´m optimistic however there is still a lot of work to do…