on Monday, June 22nd, 2020 1:58 | by Anders Eriksson
-Added progressbar for data validation
-Updated the progress bar (see figure 1)
-Fixed bug with wrong sample size (see figure 2)
-Fixed bug with unorganized barplots (see figure 2)
Exp always to the right:
plotOMparams <- plotOMparams[order(plotOMparams$desc),]
plotOMparams$group <- factor(plotOMparams$group, levels=paste(unique(plotOMparams$group)))
progress <- c(round(l(100/(length(xml_list)))),round(flycount(100/(totalflies))))
-Finished rescreening last Thursday. Started to evaluate the new data
Optomotor platform: Ran a few more tests to confirm that the machine was still working, it is. I also adjusted the 0 line so that it is at 0, by readjusting the “zero line” screw. Looks much better now but it is still not perfectly at 0. A difference 0.1 on the computer screen translates to 100 in the evaluation chart.
Ran a few more tests to confirm that the 0 line is always at 0. Readjusted the “zero line” screw. Looks much better now. It is still not perfectly at 0 but a difference of 0.1 in the chart translates to 100 in the evaluation graph.
on | by Andreas Ehweiner
on Monday, May 11th, 2020 11:38 | by Ottavia Palazzo
on Monday, April 20th, 2020 2:43 | by Andreas Ehweiner
on Wednesday, April 15th, 2020 8:46 | by Andreas Ehweiner
The measuring device needed repairing, after aperently some glued part got loosloosened and produced no signal anymore. The divice is now producing a signal again, but it is shifted.
The direction of the fly seems to be the main thing. Same fly faceing to the laser (left) and away (right)
on Friday, March 20th, 2020 3:19 | by Anders Eriksson
- Added a timer
- Previous version generated faulty xml files. This bug has been squashed (see image below)
- Display window of the software now also prints which direction the striped arena turns
on Wednesday, February 19th, 2020 1:20 | by Andreas Ehweiner
Control cross of UAS-Cas9;UAS-gFoxP with ELAV-GAL4;UAS-Cas9 is working. Flys are not able to fly and are walking poorly.
Control cross of Hs-Gal4 with UAS-Stinger is still not working.
on | by Andreas Ehweiner
Update on coditional FoxP manipulation. Either no manipulation at 18°c or switch to 30°c for adult flys.
on Monday, February 3rd, 2020 1:22 | by Andreas Ehweiner
on Monday, January 27th, 2020 1:48 | by Anders Eriksson
Proof of concept. I was playing around with ImageJ and found that there is a built in function already that does analyze the fluorescence intensity. I am just not sure exactly what it tells us. This is only as far as I have gotten yet.
The image below is the one I used.